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Molecular Modeling at the Atomic Scale

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Advanced Simulation Techniques
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Bilayer Simulations
biomolecular simulation
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Coarse Grained Models
computational biophysics applications
data
distribution
DNA Electrophoresis
DNA Translocation
DPPC Bilayer
dynamics
Em Reconstruction
enzyme reaction mechanisms
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Force Eld
Free Energy Landscape
function
Induced Dipole
IV More Applications in Molecular Biology
ligand binding analysis
M2 Helix
MD Simulation
Molecular Simulations of Protein Folding Dynamics and Thermodynamics
nanopore sequencing methods
order
parameter
PAZ Domain
POPC Bilayer
protein
Protein and Nucleic Acid Interactions with Molecular Dynamics Simulations
Protein DNA Complex
protein folding pathways
QM Method
QM Region
radial
Replica Exchange MD Simulation
RNA structure modeling
Self-Assembly of Biomolecules
SH3 Domain
simulations
Solid State Nanopore
ssDNA Molecule
TIM Barrel
U1A Protein
WW Domain

Product details

  • ISBN 9781466562950
  • Weight: 710g
  • Dimensions: 156 x 234mm
  • Publication Date: 21 Aug 2014
  • Publisher: Taylor & Francis Inc
  • Publication City/Country: US
  • Product Form: Hardback
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Description

Although molecular modeling has been around for a while, the groundbreaking advancement of massively parallel supercomputers and novel algorithms for parallelization is shaping this field into an exciting new area. Developments in molecular modeling from experimental and computational techniques have enabled a wide range of biological applications. Responding to this renaissance, Molecular Modeling at the Atomic Scale: Methods and Applications in Quantitative Biology includes discussions of advanced techniques of molecular modeling and the latest research advancements in biomolecular applications from leading experts.

The book begins with a brief introduction of major methods and applications, then covers the development of cutting-edge methods/algorithms, new polarizable force fields, and massively parallel computing techniques, followed by descriptions of how these novel techniques can be applied in various research areas in molecular biology. It also examines the self-assembly of biomacromolecules, including protein folding, RNA folding, amyloid peptide aggregation, and membrane lipid bilayer formation. Additional topics highlight biomolecular interactions, including protein interactions with DNA/RNA, membrane, ligands, and nanoparticles. Discussion of emerging topics in biomolecular modeling such as DNA sequencing with solid-state nanopores and biological water under nanoconfinement round out the coverage.

This timely summary contains the perspectives of leading experts on this transformation in molecular biology and includes state-of-the-art examples of how molecular modeling approaches are being applied to critical questions in modern quantitative biology. It pulls together the latest research and applications of molecular modeling and real-world expertise that can boost your research and development of applications in this rapidly changing field.
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Ruhong Zhou